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Antoine Bichat
Mathematical Engineer - PhD in Biostatistics
Professional Experience
Computational scientist
Servier
Paris area, France
Today - 2021
- Disease understanding, statistical modeling
- Oncology, hard-to-treat cancers, pediatric cancers
Industrial PhD Student
Enterome
Paris, France
2020 - 2018
- PhD with CIFRE convention
Biostatistician intern
Nestlé Research Center
Lausanne, Switzerland
2017
- Data analysis of microbiome 16S sequencing
- Implementation of DADA2 pipeline for sample inference
Biostatistician intern
Enterome
Paris, France
2016
- Data analysis of microbiome Illumina next-generation sequencing
- Writing and automation of bioinformatics quality control report
Education
PhD
Université Paris-Saclay
Paris area, France
2020 - 2018
- Discovering multi-scale metagenomic signatures through hierarchical organization of species
- Tutored by Dr Christophe Ambroise, Dr Mahendra Mariadassou and Mr Jonathan Plassais
Mathematics of Modelling Master’s degree
Sorbonne Université
Paris, France
2017 - 2016
- Applied Mathematics for Biology and Medical Sciences
- Data Science
Graduate Engineering School
Mines Nancy
Nancy, France
2017 - 2014
- Mathematical engineering
- Bioengineering
Classe Préparatoire aux Grandes Écoles
Lycée du Parc, MP*
Lyon, France
Teaching Experience
Data Science Starter Program
École Polytechnique, 21h, continuing education
Paris area, France
Today - 2019
An Introduction to the Linear Model
AgroParisTech, 40h, engineering students
Paris, France
2020 - 2018
Visualization with R
Mines Nancy, 3h, engineering students
Nancy, France
2017
Scientific productions
Hierarchical correction of p-values via a tree running Ornstein-Uhlenbeck process
Preprint, submited to Computational Statistics
N/A
2020
Incorporating phylogenetic information in microbiome abundance studies has no effect on detection power and FDR control
Published in Frontiers in Microbiology
N/A
2020
Quantifying the impact of tree choice in metagenomics differential abundance studies with R
Poster for UseR! 2019
Toulouse, France
2019
- Winner of Biostatistics poster prize
Volunteer Work
During Engineering School
Mines Nancy
Nancy, France
2017 - 2014
- Academic year-group representative
- Student member of the Executive Board of Mines Nancy
- President of the debating and conference club
- Communication Officer for the recruitment forum of Mines Nancy
UDPS 69 (first aid association)
First aid worker, lifeguard
Lyon area, France
2014 - 2011